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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859277.1_cds_XP_016514255.1_26723
CDS Infomation

[gene=LOC107831053] [db_xref=GeneID:107831053] [protein=sphingosine kinase 1-like isoform X2] [protein_id=XP_016514255.1] [location=complement(join(48212..48406,49349..49471,50441..50707,51137..51207,51326..51403,51528..51614,52808..52832))] [gbkey=CDS]
Sequence

ATGCCTCTTGGAGTAATACCTGCAGGCACTTCAAATGGGATGGCAAAATCTCTTCTAGAT
TCTGTCGGTGAATCTTGTACTGCATTTAACGCAACTCTTGCTATTATTAGAGGGCATACA
AGATCACTAGATGTAGCTACAGTTTCACAGGGGCAGAAAAGGTTTTTCAGTGTGCTAATG
CTTGCCTGGGGTCTTGTAGCTGATATAGATATAGAGTCCGAGAAGTATAGATGGATGGGT
AGTGCTCGAATGGATTTTTATGCAATACAGCGGATATTTTGTCTTAGAAGGTATCATGGC
TGTATAAAATTTTTGGCTGCACCAGGATATGAAAATTTTGGAGAACCACTTGAACTTGAA
GGTGAAATTAATGAACTTAACTCGAATCGGGTTCAGCAAAATTGCTATTGTGGTCCAGCT
TTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTTGTCTCAATCTGGCTTCAT
AATGTTCCTTGGGGAGGTGAAAATGTTCTCGCAGCACCCGATGCCAAGTTTGCAGATGGT
TACTTGGACTTAGTTGTGATGAAAGATTGCTCAAAATTATCCTTGCTGGCATTGATGAGT
GACTTAAATAAAGGAGGTCATGTTAGATCACCGCATGTCTTGTATTTGAAGGTAAAGGCT
TTTGTTTTAGAGCCTGGTCCACGATCAGATGATCCAAACAAGGAAGGGATTATTGATGCA
GACGGTGAGGTCCTTGCCAGAGGTAGAGGAGCTTACAAGTCTGAGCAGAGGACATTGATG
GCCTATGACAAGCTCCATATTGAAGTAGATCAAGGGTTGGCTACAGTATTTTCACCTGTC
TGTTAA

Peptide Sequence

PEP ID

XP_016514255.1
PEP Infomation

PREDICTED: sphingosine kinase 1-like isoform X2 [Nicotiana tabacum]
Sequence

MPLGVIPAGTSNGMAKSLLDSVGESCTAFNATLAIIRGHTRSLDVATVSQGQKRFFSVLM
LAWGLVADIDIESEKYRWMGSARMDFYAIQRIFCLRRYHGCIKFLAAPGYENFGEPLELE
GEINELNSNRVQQNCYCGPAFDMKGFNRKIEGPFVSIWLHNVPWGGENVLAAPDAKFADG
YLDLVVMKDCSKLSLLALMSDLNKGGHVRSPHVLYLKVKAFVLEPGPRSDDPNKEGIIDA
DGEVLARGRGAYKSEQRTLMAYDKLHIEVDQGLATVFSPVC

Transcript Sequence

Gene sequence data has not been registered.